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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
165
ChIP-seq
34
ATAC-seq
16
pCHi-C
1
DNAme array
Assay category
Transcription
165
DNA binding
34
DNA accessibility
1
DNA methylation
Target of assay
140
histone
140
histone modification
76
broad histone mark
64
narrow histone mark
16
transcription factor
9
control
5
RNA binding protein
Date released
406
November, 2017
322
August, 2017
284
October, 2019
June, 2019
216
May, 2021
152
February, 2021
151
May, 2020
140
May, 2022
139
August, 2021
120
May, 2019
111
February, 2023
94
December, 2017
87
November, 2018
80
April, 2019
74
October, 2018
48
March, 2020
46
September, 2018
43
July, 2019
41
November, 2019
40
May, 2024
35
December, 2018
25
January, 2019
24
February, 2018
23
October, 2017
16
January, 2021
12
November, 2020
11
May, 2023
11
September, 2017
10
April, 2020
8
January, 2018
7
August, 2020
5
March, 2019
4
October, 2022
3
September, 2020
2
December, 2019
1
August, 2018
1
August, 2022
1
March, 2023
Available data
133
bed narrowPeak
128
bigWig
104
bam
90
tagAlign
Organism
216
Homo sapiens
Biosample type
151
primary cell
48
in vitro differentiated cells
17
cell line
Organ
20
epithelium
20
pancreas
1
bone element
1
bone marrow
1
connective tissue
thymus
Project
115
AMP
101
T1D
Genome assembly (visualization)
141
hg19
103
GRCh38
Lab
175
Kyle Gaulton, UCSD
41
AMP-T2D consortium
Audit category:
21
inconsistent ontology term
assay_slims!
Transcription
month_released!
June, 2019
organ_slims!
thymus
BIOSAMPLE
ASSAY
216 results
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Clear Filters
ChIP-seq
ATAC-seq
pCHi-C
DNAme array
primary cell
monocyte
85
13
1
1
CD8-positive, alpha-beta T cell
33
1
naive thymus-derived CD4-positive, alpha-beta T cell
2
1
CD4-positive, alpha-beta T cell
2
neutrophil
1
1
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in vitro differentiated cells
embryonic stem cell
37
5
cardiomyocytes
3
pancreatic PP cell
3
cell line
EndoC_BH1
1
16
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