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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
356
ChIP-seq
Assay category
356
DNA binding
Target of assay
244
transcription factor
88
histone
88
histone modification
71
control
66
recombinant protein
broad histone mark
38
narrow histone mark
37
RNA binding protein
15
chromatin remodeller
2
other context
2
other post-translational modification
Date released
356
November, 2017
229
October, 2019
213
August, 2017
210
June, 2019
152
February, 2021
151
May, 2020
141
May, 2021
140
May, 2022
130
August, 2021
111
February, 2023
87
November, 2018
79
December, 2017
62
May, 2019
55
October, 2018
48
March, 2020
43
April, 2019
43
July, 2019
35
December, 2018
35
November, 2019
29
September, 2018
21
January, 2019
20
May, 2024
16
February, 2018
16
January, 2021
13
October, 2017
12
November, 2020
11
May, 2023
11
September, 2017
10
April, 2020
8
January, 2018
7
August, 2020
5
March, 2019
4
October, 2022
3
September, 2020
2
December, 2019
1
August, 2018
1
August, 2022
1
March, 2023
Available data
346
bam
316
fastq
289
bigWig
268
bed narrowPeak
267
bigBed narrowPeak
60
bed broadPeak
56
bigBed broadPeak
37
tagAlign
3
tar
Organism
356
Homo sapiens
Biosample type
307
cell line
40
tissue
9
primary cell
Organ
307
liver
49
brain
6
epithelium
6
vasculature
3
blood vessel
Project
356
AMP
Genome assembly (visualization)
271
hg19
235
GRCh38
Lab
356
AMP-T2D consortium
Audit category:
10
missing controlled_by
Audit category:
15
inconsistent control read length
4
inconsistent control run_type
assay_slims!
Transcription
organ_slims!
esophagus
target.investigated_as!
broad histone mark
BIOSAMPLE
ASSAY
356 results
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Clear Filters
ChIP-seq
cell line
HepG2
307
tissue
layer of hippocampus
10
caudate nucleus
7
cingulate gyrus
7
middle frontal area 46
7
substantia nigra
7
+ See 1 more…
primary cell
astrocyte of the cerebellum
3
brain microvascular endothelial cell
3
choroid plexus epithelial cell
3
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