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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
45
ChIP-seq
3
Hi-C
1
MPRA
Assay category
45
DNA binding
3
3D chromatin structure
Transcription
Target of assay
30
histone
30
histone modification
control
19
broad histone mark
15
transcription factor
11
RNA binding protein
11
narrow histone mark
Date released
335
November, 2017
272
August, 2017
245
October, 2019
210
June, 2019
208
May, 2021
149
February, 2021
140
May, 2022
128
May, 2020
127
August, 2021
111
February, 2023
97
May, 2019
81
November, 2018
73
December, 2017
66
April, 2019
49
March, 2020
46
September, 2018
45
October, 2018
43
July, 2019
40
May, 2024
39
November, 2019
31
December, 2018
21
January, 2019
20
October, 2017
16
February, 2018
16
January, 2021
11
May, 2023
10
April, 2020
8
January, 2018
7
August, 2020
7
November, 2020
5
March, 2019
5
September, 2017
4
October, 2022
3
September, 2020
2
December, 2019
1
August, 2018
1
August, 2022
1
March, 2023
Available data
45
bam
45
bed narrowPeak
45
bigBed narrowPeak
45
bigWig
31
fastq
3
bedpe bed3+
3
cool
3
hic
1
txt
Organism
48
Homo sapiens
Biosample type
45
tissue
3
primary cell
1
cell line
Organ
43
pancreas
5
adipose tissue
5
connective tissue
3
epithelium
Project
46
AMP
3
HPAP
Genome assembly (visualization)
48
hg19
45
GRCh38
Lab
46
AMP-T2D consortium
3
Klaus Kaestner, Upenn
Audit category:
3
audit script error
Audit category:
1
inconsistent control read length
assay_slims!
Transcription
target.investigated_as!
control
BIOSAMPLE
ASSAY
49 results
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Clear Filters
ChIP-seq
Hi-C
MPRA
tissue
body of pancreas
25
endocrine pancreas
14
omental fat pad
3
subcutaneous adipose tissue
2
pancreas
1
primary cell
pancreatic acinar cell
1
pancreatic alpha cell
1
pancreatic beta cell
1
cell line
MIN6
1
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