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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
47
ATAC-seq
30
DNase-seq
3
Hi-C
Assay category
166
Transcription
77
DNA accessibility
37
DNA binding
3
3D chromatin structure
2
DNA methylation
Date released
35
February, 2023
30
June, 2019
8
February, 2021
4
July, 2019
2
March, 2020
1
October, 2019
Available data
77
bed narrowPeak
42
bam
34
bigWig
30
bed bed3+
30
bed broadPeak
30
bigBed broadPeak
30
bigBed narrowPeak
3
bedpe bed3+
3
hic
Organism
80
Homo sapiens
Biosample type
69
tissue
8
cell line
3
primary cell
Organ
182
pancreas
164
kidney
131
epithelium
80
heart
63
vasculature
61
blood vessel
49
artery
48
limb
41
musculature of body
40
brain
35
connective tissue
33
liver
32
eye
18
ureter
12
bone element
12
skeleton
10
lung
9
blood
9
bodily fluid
8
adipose tissue
5
vein
3
nerve
2
spleen
1
pituitary gland
1
skin of body
Project
80
AMP
Genome assembly (visualization)
77
GRCh38
42
hg19
Lab
80
AMP-T2D consortium
Audit category:
1
inconsistent ontology term
assay_title!
WGBS
target.investigated_as!
histone modification
BIOSAMPLE
ASSAY
80 results
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ATAC-seq
DNase-seq
Hi-C
tissue
coronary artery
36
2
heart
18
1
heart left ventricle
2
3
1
right atrium auricular region
1
2
heart right ventricle
1
1
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cell line
smooth muscle cell of the coronary artery
8
primary cell
cardiac fibroblast
3
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