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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
199
DNase-seq
25
ATAC-seq
4
FAIRE-seq
Assay category
724
DNA binding
228
DNA accessibility
0
3D chromatin structure
Date released
187
June, 2019
14
September, 2018
November, 2018
10
October, 2019
9
August, 2017
5
September, 2017
2
July, 2019
1
November, 2020
Available data
460
bed narrowPeak
361
bam
332
bigWig
228
bigBed narrowPeak
201
bed bed3+
198
bed broadPeak
196
bigBed broadPeak
92
fastq
64
xls
60
zippedFastqFolder
19
hic
16
bedpe bed3+
14
tsv
7
bed bed3
5
hdf5
3
cool
1
bedpe
1
tar
1
txt
Organism
228
Homo sapiens
Biosample type
174
tissue
52
primary cell
in vitro differentiated cells
2
cell line
Organ
80
kidney
40
epithelium
36
limb
33
musculature of body
31
brain
30
heart
29
pancreas
18
ureter
12
vasculature
10
blood vessel
9
connective tissue
4
artery
4
eye
3
adipose tissue
3
liver
3
vein
2
nerve
Project
228
AMP
Genome assembly (visualization)
221
GRCh38
205
hg19
Lab
228
AMP-T2D consortium
Audit category:
4
inconsistent ontology term
biosample_type!
in vitro differentiated cells
month_released!
November, 2018
BIOSAMPLE
ASSAY
228 results
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DNase-seq
ATAC-seq
FAIRE-seq
tissue
heart
18
muscle of arm
17
kidney
13
1
muscle of leg
13
brain
12
+ See 40 more…
primary cell
pancreatic beta cell
7
pancreatic alpha cell
6
pancreatic acinar cell
5
pancreatic ductal cell
4
cardiac fibroblast
3
+ See 22 more…
cell line
Panc1
1
glomerular visceral epithelial cell
1
See all biosamples
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