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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
2
DNase-seq
1
ATAC-seq
1
Hi-C
Assay category
410
DNA binding
100
Transcription
3
DNA accessibility
1
3D chromatin structure
1
DNA methylation
Date released
3
October, 2019
March, 2020
1
January, 2018
Available data
12
bam
12
bed narrowPeak
4
bigWig
2
bed bed3+
2
bedpe bed3+
2
bigBed narrowPeak
2
hic
1
bed bed3
1
bed broadPeak
1
bigBed broadPeak
1
fastq
1
hdf5
Organism
4
Homo sapiens
Biosample type
222
tissue
112
primary cell
13
in vitro differentiated cells
4
cell line
Organ
2
pancreas
1
blood
1
bodily fluid
1
epithelium
1
kidney
Project
4
AMP
Genome assembly (visualization)
4
hg19
3
GRCh38
Lab
4
AMP-T2D consortium
Audit category:
1
inconsistent assembly
month_released!
March, 2020
BIOSAMPLE
ASSAY
4 results
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DNase-seq
ATAC-seq
Hi-C
cell line
Panc1
1
1
GM12878
1
glomerular visceral epithelial cell
1
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