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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
46
ATAC-seq
3
Hi-C
1
FAIRE-seq
Assay category
99
DNA binding
67
Transcription
47
DNA accessibility
3
3D chromatin structure
2
DNA methylation
Date released
35
February, 2023
8
February, 2021
3
October, 2019
2
July, 2019
2
March, 2020
Available data
56
bed narrowPeak
21
bam
15
bigWig
bed bed3+
10
bigBed narrowPeak
9
bed broadPeak
9
bigBed broadPeak
3
hic
2
bedpe bed3+
2
hdf5
1
tar
Organism
50
Homo sapiens
Biosample type
39
tissue
8
cell line
3
primary cell
Organ
173
pancreas
113
epithelium
86
kidney
50
blood vessel
50
heart
50
vasculature
45
artery
28
eye
27
liver
22
connective tissue
12
bone element
12
limb
12
skeleton
10
lung
9
blood
9
bodily fluid
7
musculature of body
6
adipose tissue
5
brain
3
vein
1
nerve
1
pituitary gland
1
skin of body
1
spleen
Project
50
AMP
Genome assembly (visualization)
46
GRCh38
15
hg19
Lab
50
AMP-T2D consortium
Audit category:
1
audit script error
files.file_type!
bed bed3+
month_released!
November, 2018
BIOSAMPLE
ASSAY
50 results
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ATAC-seq
Hi-C
FAIRE-seq
tissue
coronary artery
36
aorta
1
thoracic aorta
1
tibial artery
1
cell line
smooth muscle cell of the coronary artery
8
primary cell
endothelial cell of umbilical vein
2
1
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