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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
25
ATAC-seq
8
DNase-seq
Assay category
481
Transcription
109
DNA binding
33
DNA accessibility
7
DNA methylation
0
3D chromatin structure
Date released
10
February, 2023
5
February, 2021
5
June, 2019
3
October, 2019
2
August, 2017
2
August, 2021
2
November, 2020
1
January, 2018
1
November, 2018
1
November, 2019
1
October, 2017
Available data
17
bigWig
16
bed narrowPeak
13
bam
12
bigBed narrowPeak
11
bed bed3+
8
bed broadPeak
8
bigBed broadPeak
6
bed bed3
4
bed bedgraph
4
fastq
Organism
33
Homo sapiens
Biosample type
18
in vitro differentiated cells
8
tissue
7
primary cell
Organ
182
pancreas
164
kidney
131
epithelium
80
heart
63
vasculature
61
blood vessel
49
artery
48
limb
41
musculature of body
brain
35
connective tissue
33
liver
32
eye
18
ureter
12
bone element
12
skeleton
10
lung
9
blood
9
bodily fluid
8
adipose tissue
5
vein
3
nerve
2
spleen
1
pituitary gland
1
skin of body
Project
33
AMP
Genome assembly (visualization)
32
hg19
13
GRCh38
Lab
31
AMP-T2D consortium
2
Struan F.A. Grant, CHOP
Audit category:
4
inconsistent ontology term
organ_slims!
brain
target.investigated_as!
broad histone mark
BIOSAMPLE
ASSAY
33 results
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ATAC-seq
DNase-seq
in vitro differentiated cells
adipocyte
8
1
chondrocyte
5
immature adipocyte
2
osteoblast
1
preadipocyte
1
tissue
adipose tissue
3
omental fat pad
1
2
adipose tissue(adipose white tissue)
1
subcutaneous adipose tissue
1
primary cell
cardiac fibroblast
3
osteoblast
2
1
hepatic stellate cell
1
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