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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
70
ChIP-seq
1
single cell RNA-seq
Assay category
70
DNA binding
10
DNA accessibility
7
DNA methylation
1
Transcription
0
3D chromatin structure
Target of assay
64
transcription factor
21
RNA binding protein
16
recombinant protein
7
chromatin remodeller
6
control
3
other context
3
other post-translational modification
Date released
571
February, 2021
406
November, 2017
378
August, 2017
347
May, 2021
277
October, 2019
240
May, 2020
226
August, 2021
168
July, 2018
120
May, 2019
94
December, 2017
94
February, 2023
80
April, 2019
76
October, 2018
73
July, 2019
71
November, 2018
60
May, 2022
59
September, 2018
56
September, 2020
49
April, 2018
47
September, 2023
40
May, 2024
39
February, 2018
35
December, 2018
35
November, 2019
31
June, 2019
30
January, 2019
28
March, 2020
25
February, 2020
15
October, 2017
9
April, 2020
8
December, 2019
6
September, 2017
4
May, 2023
4
November, 2020
3
August, 2018
3
June, 2018
3
October, 2022
1
March, 2019
1
March, 2023
Available data
71
fastq
70
bam
63
bed narrowPeak
63
bigBed narrowPeak
63
bigWig
1
csv
Organism
71
Homo sapiens
Biosample type
60
cell line
10
tissue
1
primary cell
Organ
49
liver
15
blood
15
bodily fluid
6
spleen
Project
71
AMP
Genome assembly (visualization)
63
GRCh38
61
hg19
Lab
71
AMP-T2D consortium
Audit category:
3
missing controlled_by
Audit category:
5
inconsistent control read length
4
inconsistent control run_type
BIOSAMPLE
ASSAY
71 results
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Clear Filters
ChIP-seq
single cell RNA-seq
cell line
HepG2
45
GM12878
15
tissue
spleen
6
liver
4
primary cell
pancreatic cell
1
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