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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
75
WGBS
20
RRBS
11
Hi-C
1
DNAme array
Assay category
1899
Transcription
1866
DNA binding
800
DNA accessibility
96
DNA methylation
11
3D chromatin structure
1
DNA sequencing
Date released
41
May, 2022
34
July, 2019
15
August, 2017
7
November, 2018
6
February, 2021
1
August, 2021
1
December, 2018
1
May, 2021
1
October, 2019
Available data
41
zippedFastqFolder
35
bed bedMethyl
35
bigBed bedMethyl
hic
22
bigWig
22
fastq
20
bedpe bed3+
18
bam
6
tsv
5
bed bed3+
5
hdf5
3
cool
1
bedpe
Organism
107
Homo sapiens
Biosample type
61
primary cell
43
tissue
3
cell line
Organ
55
epithelium
55
pancreas
10
heart
10
musculature of body
9
liver
8
connective tissue
6
adipose tissue
5
brain
5
limb
5
vasculature
4
blood vessel
4
kidney
2
spleen
eye
1
pericardium
Project
60
AMP
47
HPAP
Genome assembly (visualization)
23
hg19
18
GRCh38
Lab
59
AMP-T2D consortium
47
Klaus Kaestner, Upenn
1
Bing Ren, UCSD
Audit category:
2
inconsistent ontology term
Audit category:
1
inconsistent assembly
files.file_type!
hic
organ_slims!
eye
BIOSAMPLE
ASSAY
107 results
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Clear Filters
WGBS
RRBS
Hi-C
DNAme array
primary cell
pancreatic alpha cell
31
pancreatic beta cell
16
astrocyte of the cerebellum
1
brain microvascular endothelial cell
1
brain pericyte
1
+ See 11 more…
tissue
heart left ventricle
4
1
gastrocnemius medialis
4
liver
3
1
skeletal muscle tissue
4
adipose tissue
3
+ See 14 more…
cell line
HepG2
1
1
Panc1
1
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