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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
251
total RNA-seq
4
Hi-C
3
small RNA-seq
1
single cell RNA-seq
Assay category
552
DNA binding
255
Transcription
41
DNA accessibility
7
DNA methylation
4
3D chromatin structure
1
DNA sequencing
Date released
143
May, 2020
59
February, 2021
20
May, 2022
10
August, 2021
8
July, 2019
5
December, 2019
5
January, 2019
4
February, 2023
2
March, 2020
1
December, 2018
1
February, 2020
1
October, 2019
Available data
230
tsv
221
bigWig
220
bam
6
fastq
4
txt
2
bedpe bed3+
2
hic
1
bed bed3+
1
csv
1
hdf5
Organism
259
Homo sapiens
Biosample type
237
tissue
16
cell line
6
primary cell
Organ
488
pancreas
482
connective tissue
401
adipose tissue
209
epithelium
197
liver
169
heart
126
kidney
72
blood vessel
72
vasculature
62
bone element
58
artery
27
brain
19
eye
15
musculature of body
14
embryo
11
limb
9
lung
5
nerve
4
skeleton
2
vein
1
pericardium
1
spinal cord
0
esophagus
Project
259
AMP
Genome assembly (visualization)
223
hg19
220
GRCh38
Lab
229
AMP-T2D consortium
20
Karen Mohlke, UNC
10
Bing Ren, UCSD
BIOSAMPLE
ASSAY
259 results
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total RNA-seq
Hi-C
small RNA-seq
single cell RNA-seq
tissue
liver
167
1
1
1
bone tissue
58
right lobe of liver
3
2
acetabular part of hip bone
1
ilium
1
+ See 2 more…
cell line
HepG2
14
2
primary cell
hepatocyte
5
endothelial cell of hepatic sinusoid
1
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