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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
20
Hi-C
Assay category
1742
DNA binding
1657
Transcription
701
DNA accessibility
23
DNA methylation
20
3D chromatin structure
1
DNA sequencing
Date released
9
March, 2020
July, 2019
4
October, 2019
3
August, 2021
1
December, 2018
1
March, 2019
1
March, 2023
1
November, 2019
Available data
17
hic
15
bedpe bed3+
1
bed bed3+
1
bedpe
1
bigWig
1
fastq
1
hdf5
Organism
20
Homo sapiens
Biosample type
12
tissue
4
in vitro differentiated cells
3
cell line
1
primary cell
Organ
9
pancreas
epithelium
3
blood vessel
3
heart
3
liver
3
vasculature
2
musculature of body
2
vein
1
kidney
Project
19
AMP
1
ITG
Genome assembly (visualization)
17
hg19
2
GRCh38
Lab
15
AMP-T2D consortium
3
Bing Ren, UCSD
1
ITG
1
Katalin Susztak, Upenn
Audit category:
4
inconsistent ontology term
Audit category:
1
inconsistent assembly
assay_title!
MeRIP-seq
month_released!
July, 2019
organ_slims!
epithelium
BIOSAMPLE
ASSAY
20 results
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Hi-C
tissue
islet of Langerhans
3
psoas muscle
2
aorta
1
heart
1
heart left ventricle
1
+ See 4 more…
in vitro differentiated cells
cardiomyocytes (cardiac muscle cell)
2
cardiac precursors (cardiac muscle cell)
1
lymphocyte of B lineage (iPSC)
1
cell line
HepG2
2
Panc1
1
primary cell
chondrocytes
1
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