Home
    • Project overview
    • Policies
    • News
    • Contact
    • Experiments
    • Annotations
    • Single Cell Embeddings
    • Statistical Models
    • Gene Perturbations
    • Data Standards & QC
    • Pipelines
    • Consortia
    • Publications
    • Single Cell Browser
    • Getting started
    • Schema

Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 27Hi-C
Assay category
  • 1403Transcription
  • 1305DNA binding
  • 453DNA accessibility
  • 273D chromatin structure
  • 19DNA methylation
Date released
  • 10March, 2020
  • 5October, 2019
  • 4July, 2019
  • 3October, 2022
  • 2August, 2021
  • 2November, 2019
  • 1March, 2019
Available data
  • 22hic
  • 19bedpe bed3+
  • 5bed bed3+
  • 5bigWig
  • 5hdf5
  • 3cool
  • 1bedpe
Organism
  • 27Homo sapiens
Biosample type
  • 11tissue
  • 9primary cell
  • 4in vitro differentiated cells
  • 3cell line
Organ
  • 8epithelium
  • 8pancreas
  • 5blood vessel
  • 5vasculature
  • 3brain
  • 3heart
  • 3liver
  • 2musculature of body
  • 2vein
  • 1connective tissue
  • 1kidney
Project
  • 24AMP
  • 3HPAP
Genome assembly (visualization)
  • 27hg19
  • 2GRCh38
Lab
  • 21AMP-T2D consortium
  • 3Klaus Kaestner, Upenn
  • 2Bing Ren, UCSD
  • 1Katalin Susztak, Upenn
Audit category:
  • 5inconsistent ontology term
  • 4audit script error
Audit category:
  • 1inconsistent assembly
BIOSAMPLE
ASSAY

27 results

search-icontable-tab-icon
Clear Filters
Hi-C
tissue
islet of Langerhans2
psoas muscle2
aorta1
heart1
heart left ventricle1
primary cell
endothelial cell of umbilical vein2
astrocyte of the cerebellum1
brain microvascular endothelial cell1
brain pericyte1
endothelial cell of hepatic sinusoid1
in vitro differentiated cells
cardiomyocytes (cardiac muscle cell)2
cardiac precursors (cardiac muscle cell)1
lymphocyte of B lineage (iPSC)1
cell line
EndoC_BH11
HepG21
Panc11
  • Contact
  • Terms of Use
  • AMP Consortium sign-in

©2025 Regents of the University of California.

  • UC San Diego