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Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 26Hi-C
Assay category
  • 1765DNA binding
  • 1506Transcription
  • 608DNA accessibility
  • 50DNA methylation
  • 263D chromatin structure
Date released
  • 10March, 2020
  • 8July, 2019
  • 5October, 2019
  • 2November, 2019
  • 1December, 2018
Available data
  • 16hic
  • 15bedpe bed3+
  • 5bed bed3+
  • 5bigWig
  • 5hdf5
  • 1fastq
Organism
  • 26Homo sapiens
Biosample type
  • 13tissue
  • 6primary cell
  • 4in vitro differentiated cells
  • 3cell line
Organ
  • 6musculature of body
  • 5blood vessel
  • 5epithelium
  • 5vasculature
  • 4limb
  • 4pancreas
  • 3brain
  • 3heart
  • 3liver
  • 2vein
  • 1connective tissue
Project
  • 26AMP
Genome assembly (visualization)
  • 21hg19
  • 1GRCh38
Lab
  • 26AMP-T2D consortium
Audit category:
  • 5inconsistent ontology term
  • 1audit script error
Audit category:
  • 1inconsistent assembly
BIOSAMPLE
ASSAY

26 results

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Clear Filters
Hi-C
tissue
gastrocnemius medialis4
psoas muscle2
aorta1
heart1
heart left ventricle1
primary cell
endothelial cell of umbilical vein2
astrocyte of the cerebellum1
brain microvascular endothelial cell1
brain pericyte1
endothelial cell of hepatic sinusoid1
in vitro differentiated cells
cardiomyocytes (cardiac muscle cell)2
cardiac precursors (cardiac muscle cell)1
lymphocyte of B lineage (iPSC)1
cell line
EndoC_BH11
HepG21
Panc11
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