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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
9
Hi-C
Assay category
1779
Transcription
1169
DNA binding
762
DNA accessibility
94
DNA methylation
9
3D chromatin structure
Date released
5
July, 2019
1
August, 2021
1
March, 2019
1
March, 2023
1
October, 2019
Available data
21
hic
bedpe bed3+
3
cool
1
bed bed3+
1
bedpe
1
bigWig
1
hdf5
Organism
9
Homo sapiens
Biosample type
6
tissue
3
primary cell
cell line
Organ
4
limb
4
musculature of body
3
blood vessel
brain
3
epithelium
3
vasculature
1
connective tissue
1
kidney
1
liver
1
pancreas
1
vein
Project
8
AMP
1
ITG
Genome assembly (visualization)
4
hg19
1
GRCh38
Lab
6
AMP-T2D consortium
1
Bing Ren, UCSD
1
ITG
1
Katalin Susztak, Upenn
Audit category:
1
audit script error
biosample_type!
cell line
files.file_type!
bedpe bed3+
lab.title!
Mark McCarthy, Oxford
organ_slims!
brain
BIOSAMPLE
ASSAY
9 results
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Hi-C
tissue
gastrocnemius medialis
4
islet of Langerhans
1
kidney
1
primary cell
chondrocytes
1
endothelial cell of hepatic sinusoid
1
endothelial cell of umbilical vein
1
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