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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
9
Hi-C
Assay category
817
DNA binding
483
Transcription
251
DNA accessibility
9
3D chromatin structure
6
DNA methylation
Date released
3
October, 2019
2
July, 2019
2
March, 2020
1
December, 2018
1
March, 2023
Available data
5
hic
4
bedpe bed3+
3
bed bed3+
3
bigWig
3
hdf5
1
fastq
Organism
9
Homo sapiens
Biosample type
tissue
4
in vitro differentiated cells
3
primary cell
2
cell line
Organ
epithelium
5
pancreas
4
blood vessel
4
vasculature
3
brain
2
liver
2
vein
1
connective tissue
Project
8
AMP
1
ITG
Genome assembly (visualization)
7
hg19
2
GRCh38
Lab
8
AMP-T2D consortium
Bing Ren, UCSD
1
ITG
Audit category:
4
inconsistent ontology term
Audit category:
1
inconsistent assembly
biosample_type!
tissue
lab.title!
Bing Ren, UCSD
organ_slims!
epithelium
BIOSAMPLE
ASSAY
9 results
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Hi-C
in vitro differentiated cells
cardiomyocytes (cardiac muscle cell)
2
cardiac precursors (cardiac muscle cell)
1
lymphocyte of B lineage (iPSC)
1
primary cell
astrocyte of the cerebellum
1
brain pericyte
1
chondrocytes
1
cell line
HepG2
1
Panc1
1
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