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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
10
Hi-C
Assay category
854
DNA binding
500
Transcription
266
DNA accessibility
11
DNA methylation
10
3D chromatin structure
1
DNA sequencing
Date released
3
March, 2020
3
October, 2019
1
August, 2021
1
December, 2018
1
July, 2019
1
March, 2023
Available data
8
hic
6
bedpe bed3+
1
bed bed3+
1
bigWig
1
fastq
1
hdf5
Organism
10
Homo sapiens
Biosample type
tissue
4
in vitro differentiated cells
4
primary cell
2
cell line
Organ
8
epithelium
pancreas
4
blood vessel
4
vasculature
brain
3
liver
2
vein
1
connective tissue
Project
9
AMP
1
ITG
Genome assembly (visualization)
8
hg19
1
GRCh38
Lab
8
AMP-T2D consortium
1
Bing Ren, UCSD
1
ITG
Audit category:
4
inconsistent ontology term
1
audit script error
biosample_type!
tissue
organ_slims!
brain
pancreas
stomach
BIOSAMPLE
ASSAY
10 results
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Hi-C
in vitro differentiated cells
cardiomyocytes (cardiac muscle cell)
2
cardiac precursors (cardiac muscle cell)
1
lymphocyte of B lineage (iPSC)
1
primary cell
endothelial cell of umbilical vein
2
chondrocytes
1
endothelial cell of hepatic sinusoid
1
cell line
HepG2
2
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