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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
8
Hi-C
Assay category
1712
Transcription
1393
DNA binding
516
DNA accessibility
44
DNA methylation
8
3D chromatin structure
1
DNA sequencing
Date released
4
July, 2019
1
August, 2021
1
December, 2018
1
March, 2019
1
March, 2023
Available data
17
hic
bedpe bed3+
bed bed3+
3
bigWig
3
hdf5
1
bedpe
1
fastq
Organism
8
Homo sapiens
Biosample type
6
tissue
1
cell line
1
primary cell
Organ
4
limb
4
musculature of body
1
blood vessel
epithelium
1
kidney
1
liver
1
pancreas
1
vasculature
1
vein
Project
7
AMP
1
ITG
Genome assembly (visualization)
2
hg19
1
GRCh38
Lab
5
AMP-T2D consortium
1
Bing Ren, UCSD
1
ITG
1
Katalin Susztak, Upenn
files.file_type!
bed bed3+
bedpe bed3+
organ_slims!
epithelium
target.investigated_as!
control
BIOSAMPLE
ASSAY
8 results
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Clear Filters
Hi-C
tissue
gastrocnemius medialis
4
islet of Langerhans
1
kidney
1
cell line
HepG2
1
primary cell
chondrocytes
1
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