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Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 14Hi-C
Assay category
  • 1918Transcription
  • 1871DNA binding
  • 832DNA accessibility
  • 97DNA methylation
  • 143D chromatin structure
  • 1DNA sequencing
Date released
  • 8July, 2019
  • 2October, 2019
  • 1August, 2021
  • 1December, 2018
  • 1March, 2019
  • 1March, 2023
Available data
  • 23hic
  • bedpe bed3+
  • 5bed bed3+
  • 5bigWig
  • 5hdf5
  • 3cool
  • 1bedpe
  • 1fastq
Organism
  • 14Homo sapiens
Biosample type
  • 6primary cell
  • 6tissue
  • 2cell line
Organ
  • 4limb
  • 4musculature of body
  • 3blood vessel
  • 3brain
  • 3epithelium
  • 3vasculature
  • 2liver
  • 2pancreas
  • 1connective tissue
  • 1kidney
  • 1vein
Project
  • 13AMP
  • 1ITG
Genome assembly (visualization)
  • 8hg19
  • 2GRCh38
Lab
  • 11AMP-T2D consortium
  • 1Bing Ren, UCSD
  • 1ITG
  • 1Katalin Susztak, Upenn
Audit category:
  • 1audit script error
Audit category:
  • 1inconsistent assembly
files.file_type!
  • bedpe bed3+
BIOSAMPLE
ASSAY

14 results

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Clear Filters
Hi-C
primary cell
astrocyte of the cerebellum1
brain microvascular endothelial cell1
brain pericyte1
chondrocytes1
endothelial cell of hepatic sinusoid1
tissue
gastrocnemius medialis4
islet of Langerhans1
kidney1
cell line
HepG21
Panc11
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