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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
14
Hi-C
Assay category
546
Transcription
317
DNA binding
228
DNA accessibility
55
DNA methylation
14
3D chromatin structure
Date released
3
March, 2020
3
October, 2022
2
July, 2019
2
November, 2019
2
October, 2019
1
August, 2021
1
March, 2019
Available data
10
hic
9
bedpe bed3+
3
bed bed3+
3
bigWig
3
cool
3
hdf5
1
bedpe
Organism
14
Homo sapiens
Biosample type
7
primary cell
5
tissue
2
cell line
Organ
9
pancreas
8
epithelium
6
musculature of body
5
blood vessel
5
vasculature
4
limb
4
liver
3
brain
3
heart
2
vein
1
connective tissue
1
kidney
Project
11
AMP
3
HPAP
Genome assembly (visualization)
13
hg19
1
GRCh38
Lab
9
AMP-T2D consortium
3
Klaus Kaestner, Upenn
2
Bing Ren, UCSD
Audit category:
4
audit script error
1
inconsistent ontology term
Audit category:
1
inconsistent assembly
month_released!
August, 2022
organ_slims!
gonad
BIOSAMPLE
ASSAY
14 results
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Hi-C
primary cell
endothelial cell of umbilical vein
2
brain microvascular endothelial cell
1
endothelial cell of hepatic sinusoid
1
pancreatic acinar cell
1
pancreatic alpha cell
1
+ See 1 more…
tissue
islet of Langerhans
3
aorta
1
pancreas
1
cell line
EndoC_BH1
1
Panc1
1
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