Home
    • Project overview
    • Policies
    • News
    • Contact
    • Experiments
    • Annotations
    • Single Cell Embeddings
    • Statistical Models
    • Gene Perturbations
    • Data Standards & QC
    • Pipelines
    • Consortia
    • Publications
    • Single Cell Browser
    • Getting started
    • Schema

Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 24Hi-C
Assay category
  • 1861Transcription
  • 1297DNA binding
  • 712DNA accessibility
  • 70DNA methylation
  • 243D chromatin structure
  • 1DNA sequencing
Date released
  • 8March, 2020
  • 4July, 2019
  • 3August, 2021
  • 3October, 2022
  • 2November, 2019
  • 2October, 2019
  • 1March, 2019
  • 1March, 2023
Available data
  • 19hic
  • 16bedpe bed3+
  • 3cool
  • 1bedpe
Organism
  • 24Homo sapiens
Biosample type
  • 16tissue
  • 6primary cell
  • 2cell line
Organ
  • 8pancreas
  • 6epithelium
  • 6musculature of body
  • 4limb
  • 3blood vessel
  • 3heart
  • 3vasculature
  • 2liver
  • 2vein
  • 1kidney
Project
  • 20AMP
  • 3HPAP
  • 1ITG
Genome assembly (visualization)
  • 18hg19
  • 1GRCh38
Lab
  • 16AMP-T2D consortium
  • 3Bing Ren, UCSD
  • 3Klaus Kaestner, Upenn
  • 1ITG
  • 1Katalin Susztak, Upenn
Audit category:
  • 4audit script error
  • 1inconsistent ontology term
replication_type!
  • isogenic
BIOSAMPLE
ASSAY

24 results

search-icontable-tab-icon
Clear Filters
Hi-C
tissue
gastrocnemius medialis4
islet of Langerhans3
psoas muscle2
aorta1
heart1
primary cell
endothelial cell of umbilical vein2
chondrocytes1
pancreatic acinar cell1
pancreatic alpha cell1
pancreatic beta cell1
cell line
EndoC_BH11
HepG21
  • Contact
  • Terms of Use
  • AMP Consortium sign-in

©2025 Regents of the University of California.

  • UC San Diego