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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
77
ATAC-seq
6
snATAC-seq
2
DNase-seq
Assay category
125
Transcription
85
DNA accessibility
22
DNA binding
6
DNA methylation
3D chromatin structure
Date released
70
August, 2021
11
May, 2023
3
October, 2019
1
February, 2023
Available data
177
bed narrowPeak
bam
115
bigWig
113
bigBed narrowPeak
110
bed bed3+
110
bed broadPeak
110
bigBed broadPeak
64
xls
3
fastq
1
bed bed3
Organism
85
Homo sapiens
Biosample type
83
tissue
2
primary cell
Organ
98
pancreas
83
kidney
81
epithelium
35
artery
35
blood vessel
35
heart
35
vasculature
28
eye
21
liver
20
connective tissue
10
lung
9
blood
9
bodily fluid
4
bone element
4
skeleton
3
adipose tissue
2
brain
2
musculature of body
1
pituitary gland
1
skin of body
Project
85
AMP
Genome assembly (visualization)
75
GRCh38
1
hg19
Lab
81
Katalin Susztak, Upenn
4
AMP-T2D consortium
assay_slims!
3D chromatin structure
files.file_type!
bam
BIOSAMPLE
ASSAY
85 results
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ATAC-seq
snATAC-seq
DNase-seq
tissue
kidney
75
6
brain
1
islet of Langerhans
1
primary cell
kidney glomerular epithelial cell
1
kidney tubule cell
1
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