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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
58
ATAC-seq
48
snATAC-seq
2
FAIRE-seq
1
DNase-seq
Assay category
205
DNA binding
Transcription
109
DNA accessibility
53
DNA methylation
1
3D chromatin structure
Date released
78
May, 2022
27
February, 2021
2
August, 2017
1
March, 2019
1
November, 2018
Available data
92
bigWig
77
bed narrowPeak
71
bam
60
zippedFastqFolder
49
fastq
14
tsv
10
bed bed3
10
bigBed narrowPeak
7
bed bedgraph
5
bed bed3+
4
txt
2
bed broadPeak
1
bigBed broadPeak
1
tar
Organism
109
Homo sapiens
Biosample type
88
primary cell
21
tissue
Organ
60
pancreas
39
epithelium
Project
87
HPAP
22
AMP
Genome assembly (visualization)
63
hg19
GRCh38
Lab
87
Klaus Kaestner, Upenn
18
Kyle Gaulton, UCSD
3
AMP-T2D consortium
1
Mark McCarthy, Oxford
Audit category:
27
audit script error
assay_slims!
Transcription
assembly!
GRCh38
BIOSAMPLE
ASSAY
109 results
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ATAC-seq
snATAC-seq
FAIRE-seq
DNase-seq
primary cell
Langerhans cell
48
pancreatic alpha cell
22
pancreatic beta cell
13
pancreatic acinar cell
4
skeletal muscle myoblast
1
tissue
islet of Langerhans
19
1
pancreas
1
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