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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
36
ChIP-seq
4
ATAC-seq
1
DNase-seq
Assay category
401
Transcription
36
DNA binding
5
DNA accessibility
3
DNA methylation
Target of assay
31
histone
31
histone modification
20
broad histone mark
11
narrow histone mark
5
control
Date released
36
August, 2017
1
February, 2023
1
January, 2018
1
June, 2019
1
November, 2019
1
October, 2019
Available data
42
bam
fastq
25
bigWig
13
bed narrowPeak
10
bigBed narrowPeak
8
tagAlign
6
bed bed3+
3
bed broadPeak
2
bigBed broadPeak
Organism
41
Homo sapiens
Biosample type
41
tissue
Organ
210
kidney
206
brain
190
heart
181
pancreas
143
epithelium
125
liver
104
vasculature
103
limb
102
blood vessel
93
connective tissue
78
artery
67
musculature of body
41
adipose tissue
38
nerve
37
eye
20
vein
18
ureter
12
bone element
12
skeleton
10
lung
9
blood
9
bodily fluid
4
gonad
4
ovary
2
pituitary gland
1
lymph node
1
skin of body
Project
41
AMP
Genome assembly (visualization)
6
hg19
2
GRCh38
Lab
41
AMP-T2D consortium
Audit category:
1
inconsistent ontology term
files.file_type!
fastq
month_released!
May, 2019
BIOSAMPLE
ASSAY
41 results
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ChIP-seq
ATAC-seq
DNase-seq
tissue
subcutaneous abdominal adipose tissue
36
adipose tissue
3
adipose tissue(adipose white tissue)
1
omental fat pad
1
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