Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
21
ATAC-seq
2
DNase-seq
1
whole genome sequencing assay
Assay category
478
DNA binding
63
Transcription
23
DNA accessibility
4
3D chromatin structure
1
DNA methylation
1
DNA sequencing
Date released
16
May, 2021
2
March, 2020
2
October, 2019
1
August, 2021
1
February, 2021
1
January, 2018
1
November, 2019
Available data
5
bigWig
4
bam
4
bed narrowPeak
2
bigBed narrowPeak
1
bed bed3
1
bed bed3+
1
bed broadPeak
1
bigBed broadPeak
1
tsv
1
vcf
Organism
24
Homo sapiens
Biosample type
429
tissue
288
primary cell
43
in vitro differentiated cells
24
cell line
Organ
20
epithelium
20
pancreas
artery
8
blood vessel
8
heart
8
vasculature
2
liver
1
blood
1
bodily fluid
1
kidney
Project
24
AMP
Genome assembly (visualization)
7
hg19
4
GRCh38
Lab
23
AMP-T2D consortium
1
Bing Ren, UCSD
Audit category:
19
inconsistent ontology term
1
inconsistent replicate
organ_slims!
artery
BIOSAMPLE
ASSAY
24 results
search-icon
table-tab-icon
Clear Filters
ATAC-seq
DNase-seq
whole genome sequencing assay
cell line
EndoC_BH1
19
HepG2
1
1
GM12878
1
Panc1
1
glomerular visceral epithelial cell
1
Download