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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
105
total RNA-seq
18
snATAC-seq
11
ATAC-seq
Assay category
105
Transcription
88
DNA binding
29
DNA accessibility
Date released
51
May, 2021
45
May, 2020
18
February, 2023
16
January, 2021
4
March, 2020
Available data
98
bam
98
bigWig
98
tsv
Organism
134
Homo sapiens
Biosample type
104
primary cell
28
tissue
2
cell line
Organ
30
pancreas
8
blood
8
bodily fluid
2
epithelium
Project
2197
AMP
274
HPAP
134
T1D
47
KPMP
19
LungMap
4
community
Genome assembly (visualization)
98
GRCh38
98
hg19
Lab
130
Kyle Gaulton, UCSD
4
AMP-T2D consortium
Audit category:
6
inconsistent ontology term
files.file_type!
xls
lab.title!
Bing Ren, UCSD
BIOSAMPLE
ASSAY
134 results
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total RNA-seq
snATAC-seq
ATAC-seq
primary cell
monocyte
53
peripheral blood mononuclear cell
8
B cell
2
CD8-positive, alpha-beta T cell
2
T follicular helper cell
2
+ See 21 more…
tissue
islet of Langerhans
7
6
11
pancreas
4
cell line
EndoC_BH1
2
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