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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
5
total RNA-seq
2
DNase-seq
1
ATAC-seq
Assay category
5
Transcription
4
DNA binding
3
DNA accessibility
1
3D chromatin structure
1
DNA methylation
Date released
5
December, 2019
2
June, 2019
1
October, 2019
Available data
8
bam
7
bigWig
5
tsv
3
bed narrowPeak
2
bed bed3+
2
bed broadPeak
2
bigBed broadPeak
2
bigBed narrowPeak
Organism
8
Homo sapiens
Biosample type
199
tissue
15
cell line
8
primary cell
Organ
254
epithelium
226
pancreas
23
connective tissue
18
kidney
9
vasculature
8
blood
8
bodily fluid
8
brain
8
liver
7
blood vessel
7
heart
3
musculature of body
3
vein
2
adipose tissue
2
artery
1
eye
1
pericardium
Project
8
AMP
Genome assembly (visualization)
8
GRCh38
8
hg19
Lab
8
AMP-T2D consortium
Audit category:
1
inconsistent ontology term
lab.title!
Xin Sun, UCSD
BIOSAMPLE
ASSAY
8 results
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total RNA-seq
DNase-seq
ATAC-seq
primary cell
hepatocyte
5
1
Liver fetal (hepatocyte)
1
hepatic stellate cell
1
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