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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
35
total RNA-seq
15
small RNA-seq
6
ATAC-seq
3
single cell RNA-seq
2
FAIRE-seq
Assay category
53
Transcription
27
DNA methylation
8
3D chromatin structure
8
DNA accessibility
Target of assay
3
control
Date released
290
May, 2020
262
August, 2021
226
February, 2021
216
May, 2021
198
February, 2023
186
June, 2019
168
July, 2018
159
May, 2022
99
August, 2017
62
October, 2019
61
July, 2019
59
September, 2020
49
April, 2018
47
September, 2023
45
November, 2019
41
September, 2018
23
February, 2020
19
April, 2020
19
March, 2020
16
January, 2021
15
February, 2018
14
May, 2023
10
November, 2018
8
December, 2019
7
August, 2020
7
October, 2017
6
November, 2020
5
January, 2019
5
September, 2017
4
March, 2019
4
March, 2023
3
August, 2018
3
June, 2018
2
January, 2018
2
October, 2018
1
August, 2022
Available data
61
bam
61
bigWig
53
tsv
7
bed narrowPeak
2
bigBed narrowPeak
Organism
61
Homo sapiens
Biosample type
45
tissue
16
primary cell
Organ
16
connective tissue
15
heart
13
brain
adipose tissue
7
blood vessel
7
kidney
7
liver
7
vasculature
5
epithelium
4
musculature of body
4
pancreas
3
artery
1
pericardium
Project
61
AMP
Genome assembly (visualization)
60
hg19
59
GRCh38
Lab
61
AMP-T2D consortium
organ_slims!
adipose tissue
target.investigated_as!
histone
BIOSAMPLE
ASSAY
61 results
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Clear Filters
total RNA-seq
small RNA-seq
ATAC-seq
single cell RNA-seq
FAIRE-seq
tissue
body of pancreas
2
2
heart left ventricle
2
2
right lobe of liver
2
2
frontal cortex
1
1
1
heart
2
1
+ See 15 more…
primary cell
cerebellar granule cell
2
skeletal muscle satellite cell
1
1
Purkinje cell
1
cardiac atrium fibroblast
1
cardiac ventricle fibroblast
1
+ See 9 more…
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