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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
61
total RNA-seq
46
ATAC-seq
6
single cell RNA-seq
5
DNase-seq
Assay category
79
DNA binding
67
Transcription
51
DNA accessibility
3
DNA methylation
1
3D chromatin structure
Date released
60
February, 2021
35
February, 2023
7
July, 2019
6
August, 2021
3
February, 2020
3
June, 2019
3
October, 2019
1
March, 2020
Available data
74
bam
67
tsv
66
bigWig
51
bed narrowPeak
5
bed bed3+
5
bed broadPeak
5
bigBed broadPeak
5
bigBed narrowPeak
Organism
118
Homo sapiens
Biosample type
60
cell line
56
tissue
2
primary cell
Organ
652
pancreas
515
connective tissue
409
adipose tissue
epithelium
288
kidney
243
heart
222
liver
125
vasculature
123
blood vessel
107
artery
74
bone element
61
brain
51
eye
51
limb
44
musculature of body
19
lung
18
ureter
16
skeleton
14
embryo
9
blood
9
bodily fluid
8
nerve
3
vein
2
spleen
1
pericardium
1
pituitary gland
1
skin of body
1
spinal cord
Project
118
AMP
Genome assembly (visualization)
109
GRCh38
74
hg19
Lab
118
AMP-T2D consortium
organ_slims!
epithelium
BIOSAMPLE
ASSAY
118 results
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total RNA-seq
ATAC-seq
single cell RNA-seq
DNase-seq
cell line
smooth muscle cell of the coronary artery
52
8
tissue
coronary artery
1
36
2
aorta
1
4
tibial artery
1
1
2
ascending aorta
2
1
thoracic aorta
2
1
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primary cell
pericardium fibroblast
1
smooth muscle cell of the coronary artery
1
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