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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
ATAC-seq
56
snATAC-seq
9
DNase-seq
Assay category
182
Transcription
65
DNA accessibility
48
DNA methylation
32
DNA binding
1
3D chromatin structure
Date released
27
February, 2021
21
May, 2022
8
January, 2021
7
June, 2019
2
October, 2019
Available data
27
fastq
21
zippedFastqFolder
7
bam
7
bed bed3+
7
bed broadPeak
7
bed narrowPeak
7
bigBed broadPeak
7
bigBed narrowPeak
7
bigWig
Organism
65
Homo sapiens
Biosample type
65
primary cell
44
tissue
Organ
8
blood
8
bodily fluid
8
epithelium
8
kidney
1
blood vessel
1
connective tissue
1
heart
1
vasculature
Project
48
HPAP
9
AMP
8
T1D
Genome assembly (visualization)
27
GRCh38
hg19
Lab
48
Klaus Kaestner, Upenn
9
AMP-T2D consortium
8
Kyle Gaulton, UCSD
Audit category:
27
audit script error
assay_title!
ATAC-seq
assembly!
hg19
month_released!
September, 2017
BIOSAMPLE
ASSAY
65 results
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snATAC-seq
DNase-seq
primary cell
Langerhans cell
48
peripheral blood mononuclear cell
8
kidney tubule cell
3
glomerular visceral epithelial cell
2
kidney glomerular epithelial cell
2
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