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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
ATAC-seq
6
DNase-seq
Assay category
550
DNA binding
186
Transcription
6
DNA accessibility
5
DNA methylation
3
3D chromatin structure
1
DNA sequencing
Date released
3
November, 2018
2
June, 2019
1
August, 2017
Available data
5
bam
5
bed bed3+
5
bed broadPeak
5
bed narrowPeak
5
bigBed broadPeak
5
bigBed narrowPeak
5
bigWig
3
fastq
Organism
6
Homo sapiens
Biosample type
4
tissue
2
primary cell
Organ
87
kidney
36
limb
34
musculature of body
32
brain
30
heart
21
pancreas
20
epithelium
18
ureter
12
vasculature
10
blood vessel
10
lung
9
connective tissue
8
blood
8
bodily fluid
6
liver
4
artery
4
eye
3
vein
2
adipose tissue
2
nerve
1
spleen
Project
6
AMP
Genome assembly (visualization)
5
GRCh38
5
hg19
Lab
6
AMP-T2D consortium
assay_title!
ATAC-seq
month_released!
July, 2019
target.investigated_as!
other context
BIOSAMPLE
ASSAY
6 results
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DNase-seq
tissue
liver
2
right lobe of liver
2
primary cell
hepatic stellate cell
1
hepatocyte
1
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