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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
13
ATAC-seq
1
snATAC-seq
Assay category
66
Transcription
14
DNA accessibility
Date released
13
February, 2023
1
May, 2022
Available data
492
bed narrowPeak
bam
350
bigWig
241
bigBed narrowPeak
209
bed bed3+
208
bed broadPeak
206
bigBed broadPeak
102
fastq
64
xls
60
zippedFastqFolder
14
tsv
12
bed bed3
7
bed bedgraph
4
txt
1
tar
Organism
14
Homo sapiens
Biosample type
8
in vitro differentiated cells
6
tissue
Organ
5
connective tissue
4
bone element
4
skeleton
1
brain
1
musculature of body
Project
14
AMP
Genome assembly (visualization)
14
hg19
Lab
11
AMP-T2D consortium
3
Struan F.A. Grant, CHOP
Audit category:
1
audit script error
1
inconsistent ontology term
assay_title!
CRISPR genome editing followed by DNA sequencing
files.file_type!
bam
BIOSAMPLE
ASSAY
14 results
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ATAC-seq
snATAC-seq
in vitro differentiated cells
chondrocyte
5
Progenitor cell of Hypothalamus (neural progenitor cell)
1
embryonic stem cell
1
neuron cell of Hypothalamus (neuron)
1
tissue
acetabular part of hip bone
1
brain
1
ilium
1
ischium
1
pubis
1
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