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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
29
ATAC-seq
1
DNase-seq
Assay category
426
DNA binding
115
Transcription
30
DNA accessibility
4
3D chromatin structure
1
DNA methylation
1
DNA sequencing
Date released
16
May, 2021
9
February, 2021
2
March, 2020
1
January, 2018
1
November, 2019
1
October, 2019
Available data
12
bam
12
bed narrowPeak
5
bigWig
2
bigBed narrowPeak
1
bed bed3
1
bed bed3+
1
bed broadPeak
bigBed broadPeak
1
tsv
Organism
30
Homo sapiens
Biosample type
290
tissue
259
primary cell
42
in vitro differentiated cells
30
cell line
Organ
20
epithelium
19
pancreas
8
artery
8
blood vessel
8
heart
8
vasculature
1
blood
1
bodily fluid
1
kidney
1
liver
Project
30
AMP
Genome assembly (visualization)
14
hg19
11
GRCh38
Lab
30
AMP-T2D consortium
Audit category:
19
inconsistent ontology term
1
inconsistent replicate
assay_title!
FAIRE-seq
files.file_type!
bigBed broadPeak
BIOSAMPLE
ASSAY
30 results
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ATAC-seq
DNase-seq
cell line
EndoC_BH1
19
smooth muscle cell of the coronary artery
8
GM12878
1
HepG2
1
glomerular visceral epithelial cell
1
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