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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
76
ATAC-seq
9
DNase-seq
6
snATAC-seq
FAIRE-seq
Assay category
181
Transcription
113
DNA binding
91
DNA accessibility
7
DNA methylation
3
3D chromatin structure
1
DNA sequencing
Date released
187
June, 2019
105
February, 2023
100
May, 2020
99
May, 2022
82
August, 2021
49
February, 2021
34
May, 2021
32
October, 2019
26
November, 2019
16
January, 2021
14
September, 2018
11
May, 2023
10
April, 2020
10
August, 2017
9
November, 2018
8
October, 2017
7
August, 2020
6
July, 2019
5
September, 2017
4
March, 2019
4
March, 2020
3
January, 2018
3
September, 2020
2
November, 2020
1
August, 2022
Available data
85
bed narrowPeak
64
xls
19
bam
11
bigWig
9
bed bed3+
9
bed broadPeak
9
bigBed broadPeak
9
bigBed narrowPeak
9
fastq
Organism
91
Homo sapiens
Biosample type
79
tissue
12
in vitro differentiated cells
Organ
70
kidney
3
connective tissue
3
liver
2
brain
2
pancreas
1
adipose tissue
1
spleen
Project
91
AMP
Genome assembly (visualization)
83
GRCh38
21
hg19
Lab
70
Katalin Susztak, Upenn
19
AMP-T2D consortium
2
Struan F.A. Grant, CHOP
assay_title!
FAIRE-seq
lab.title!
Rohit N. Kulkarni, M.D., Ph.D.
BIOSAMPLE
ASSAY
91 results
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ATAC-seq
DNase-seq
snATAC-seq
tissue
kidney
64
6
body of pancreas
2
brain
2
liver
2
omental fat pad
1
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in vitro differentiated cells
neural progenitor cell
10
adipocyte
1
osteoblast
1
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