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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
36
DNase-seq
15
ATAC-seq
8
snATAC-seq
Assay category
126
DNA binding
59
DNA accessibility
11
Transcription
4
3D chromatin structure
1
DNA methylation
Date released
32
June, 2019
8
February, 2021
8
January, 2021
6
October, 2019
4
February, 2023
1
January, 2018
Available data
46
bam
46
bed narrowPeak
39
bigWig
36
bed bed3+
36
bed broadPeak
36
bigBed broadPeak
36
bigBed narrowPeak
4
bed bed3
Organism
59
Homo sapiens
Biosample type
50
tissue
8
primary cell
1
cell line
Organ
173
pancreas
163
kidney
123
epithelium
77
heart
58
vasculature
56
blood vessel
49
artery
44
limb
37
brain
35
musculature of body
34
connective tissue
32
eye
29
liver
18
ureter
12
bone element
12
skeleton
10
lung
9
blood
9
bodily fluid
8
adipose tissue
3
nerve
3
vein
2
spleen
1
pituitary gland
1
skin of body
Project
51
AMP
8
T1D
Genome assembly (visualization)
51
hg19
46
GRCh38
Lab
51
AMP-T2D consortium
8
Kyle Gaulton, UCSD
Audit category:
1
inconsistent ontology term
assay_title!
HiChIP
BIOSAMPLE
ASSAY
59 results
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DNase-seq
ATAC-seq
snATAC-seq
tissue
muscle of arm
17
muscle of leg
13
tibial artery
2
1
tibial nerve
2
1
acetabular part of hip bone
1
+ See 13 more…
primary cell
peripheral blood mononuclear cell
8
cell line
GM12878
1
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