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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
8
snATAC-seq
1
ATAC-seq
1
FAIRE-seq
Assay category
13
DNA binding
10
DNA accessibility
2
3D chromatin structure
Date released
8
January, 2021
1
January, 2018
1
October, 2019
Available data
2
bigWig
1
bam
1
bed narrowPeak
1
bigBed narrowPeak
1
tar
Organism
10
Homo sapiens
Biosample type
9
primary cell
1
cell line
Organ
88
pancreas
54
epithelium
28
eye
21
liver
18
connective tissue
10
lung
9
blood
9
bodily fluid
9
kidney
4
bone element
4
skeleton
3
adipose tissue
3
brain
2
musculature of body
1
blood vessel
1
pituitary gland
1
skin of body
1
vasculature
1
vein
Project
8
T1D
2
AMP
Genome assembly (visualization)
4
hg19
GRCh38
Lab
8
Kyle Gaulton, UCSD
2
AMP-T2D consortium
assembly!
GRCh38
audit.ERROR.category!
inconsistent ontology term
BIOSAMPLE
ASSAY
10 results
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snATAC-seq
ATAC-seq
FAIRE-seq
primary cell
peripheral blood mononuclear cell
8
endothelial cell of umbilical vein
1
cell line
GM12878
1
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