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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
70
ATAC-seq
5
FAIRE-seq
2
DNase-seq
Assay category
108
DNA binding
77
DNA accessibility
Date released
38
May, 2022
30
February, 2023
3
August, 2017
2
August, 2021
2
July, 2019
1
November, 2018
1
October, 2019
Available data
92
bigWig
77
bed narrowPeak
71
bam
22
fastq
14
tsv
10
bed bed3
10
bigBed narrowPeak
7
bed bedgraph
5
bed bed3+
4
txt
2
bed broadPeak
1
bigBed broadPeak
1
tar
Organism
77
Homo sapiens
Biosample type
70
tissue
4
in vitro differentiated cells
3
primary cell
Organ
27
eye
20
liver
20
pancreas
13
epithelium
3
connective tissue
1
adipose tissue
1
blood vessel
1
brain
1
kidney
1
vasculature
1
vein
Project
77
AMP
Genome assembly (visualization)
GRCh38
370
hg19
Lab
35
AMP-T2D consortium
20
Karen Mohlke, UNC
18
Kyle Gaulton, UCSD
4
Struan F.A. Grant, CHOP
Audit category:
1
inconsistent ontology term
assembly!
GRCh38
award.project!
HPAP
BIOSAMPLE
ASSAY
77 results
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ATAC-seq
FAIRE-seq
DNase-seq
tissue
liver
20
islet of Langerhans
18
1
retina
15
pigmented layer of retina
12
adipose tissue
1
+ See 3 more…
in vitro differentiated cells
adipocyte
1
embryonic stem cell
1
neuron cell of Hypothalamus (neuron)
1
osteoblast
1
primary cell
skeletal muscle myoblast
2
endothelial cell of umbilical vein
1
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