Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
138
ATAC-seq
27
snATAC-seq
17
DNase-seq
Assay category
356
DNA binding
309
Transcription
182
DNA accessibility
29
DNA methylation
5
3D chromatin structure
Date released
70
August, 2021
48
February, 2023
16
June, 2019
13
October, 2019
11
May, 2023
10
April, 2020
8
January, 2021
2
March, 2019
1
August, 2017
1
August, 2022
1
July, 2019
1
October, 2017
Available data
115
bed narrowPeak
64
xls
19
bam
18
bigWig
17
bed broadPeak
16
bed bed3+
16
bigBed broadPeak
16
bigBed narrowPeak
2
fastq
Organism
181
Homo sapiens
Biosample type
182
tissue
181
primary cell
16
cell line
Organ
82
kidney
37
heart
35
artery
35
blood vessel
35
vasculature
29
pancreas
13
brain
10
lung
1
eye
1
liver
1
pituitary gland
1
skin of body
Project
151
AMP
21
T1D
10
LungMap
Genome assembly (visualization)
335
GRCh38
hg19
Lab
81
Katalin Susztak, Upenn
68
AMP-T2D consortium
21
Kyle Gaulton, UCSD
10
Xin Sun, UCSD
1
Maike Sander, UCSD
1
Mark McCarthy, Oxford
Audit category:
1
audit script error
assembly!
hg19
month_released!
May, 2019
organ_slims!
mammary gland
BIOSAMPLE
ASSAY
182 results
search-icon
table-tab-icon
Clear Filters
ATAC-seq
snATAC-seq
DNase-seq
tissue
kidney
75
6
coronary artery
35
islet of Langerhans
26
7
lung
10
pancreas
4
+ See 17 more…
See all biosamples
Download