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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
8
DNase-seq
4
ATAC-seq
Assay category
12
DNA accessibility
6
DNA binding
Date released
5
June, 2019
3
October, 2019
2
August, 2017
1
November, 2018
1
November, 2020
Available data
17
bigWig
15
bed narrowPeak
12
bam
12
bigBed narrowPeak
9
bed bed3+
8
bed broadPeak
8
bigBed broadPeak
6
bed bed3
4
bed bedgraph
4
fastq
Organism
12
Homo sapiens
Biosample type
5
primary cell
4
tissue
3
in vitro differentiated cells
Organ
79
kidney
39
epithelium
35
limb
33
brain
32
musculature of body
32
pancreas
29
heart
18
ureter
12
connective tissue
11
vasculature
10
blood vessel
6
liver
4
adipose tissue
4
artery
4
eye
3
vein
2
nerve
1
spleen
Project
12
AMP
Genome assembly (visualization)
11
hg19
9
GRCh38
Lab
12
AMP-T2D consortium
Audit category:
inconsistent ontology term
audit.ERROR.category!
inconsistent ontology term
organ_slims!
pituitary gland
BIOSAMPLE
ASSAY
12 results
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DNase-seq
ATAC-seq
primary cell
cardiac fibroblast
2
brain pericyte
1
hepatic stellate cell
1
osteoblast
1
tissue
omental fat pad
2
adipose tissue
1
subcutaneous adipose tissue
1
in vitro differentiated cells
adipocyte
1
2
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