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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
8
snATAC-seq
2
DNase-seq
1
FAIRE-seq
Assay category
77
DNA binding
11
DNA accessibility
2
3D chromatin structure
Date released
8
January, 2021
3
October, 2019
January, 2018
Available data
3
bam
3
bed narrowPeak
3
bigBed narrowPeak
3
bigWig
2
bed bed3+
2
bed broadPeak
2
bigBed broadPeak
1
tar
Organism
11
Homo sapiens
Biosample type
11
primary cell
Organ
162
kidney
154
pancreas
102
epithelium
76
heart
57
vasculature
56
blood vessel
49
artery
43
limb
37
brain
33
musculature of body
32
eye
29
connective tissue
28
liver
18
ureter
12
bone element
12
skeleton
10
lung
8
blood
8
bodily fluid
6
adipose tissue
3
nerve
3
vein
spleen
1
pituitary gland
1
skin of body
Project
8
T1D
3
AMP
Genome assembly (visualization)
3
hg19
2
GRCh38
Lab
8
Kyle Gaulton, UCSD
3
AMP-T2D consortium
audit.ERROR.category!
inconsistent ontology term
month_released!
January, 2018
organ_slims!
spleen
BIOSAMPLE
ASSAY
11 results
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snATAC-seq
DNase-seq
FAIRE-seq
primary cell
peripheral blood mononuclear cell
8
endothelial cell of umbilical vein
2
1
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