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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
108
ATAC-seq
Assay category
190
Transcription
108
DNA accessibility
61
DNA binding
Date released
187
June, 2019
105
February, 2023
100
May, 2020
99
May, 2022
82
August, 2021
February, 2021
34
May, 2021
33
October, 2019
26
November, 2019
16
January, 2021
14
September, 2018
11
August, 2017
11
May, 2023
10
April, 2020
10
November, 2018
8
July, 2019
8
October, 2017
7
August, 2020
5
September, 2017
4
March, 2019
4
March, 2020
3
January, 2018
3
September, 2020
2
November, 2020
1
August, 2022
Available data
53
bigWig
52
bam
8
fastq
6
bed narrowPeak
1
bed broadPeak
Organism
108
Homo sapiens
Biosample type
100
primary cell
8
tissue
Organ
5
pancreas
1
adipose tissue
1
brain
1
connective tissue
1
spleen
Project
108
AMP
Genome assembly (visualization)
52
hg19
8
GRCh38
Lab
107
AMP-T2D consortium
1
Stephen Parker, UMich
Audit category:
4
inconsistent ontology term
audit.NOT_COMPLIANT.category!
missing controlled_by
month_released!
February, 2021
BIOSAMPLE
ASSAY
108 results
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ATAC-seq
primary cell
CD4-positive, alpha-beta memory T cell
22
naive thymus-derived CD4-positive, alpha-beta T cell
22
macrophage
11
B cell
2
CD8-positive, alpha-beta T cell
2
+ See 23 more…
tissue
body of pancreas
4
cerebellum (Hemisphere)
1
islet of Langerhans
1
omental fat pad
1
spleen
1
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