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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
42
ATAC-seq
1
DNase-seq
Assay category
198
DNA binding
138
Transcription
43
DNA accessibility
4
3D chromatin structure
Date released
12
August, 2021
12
February, 2023
5
May, 2021
5
November, 2019
4
February, 2021
4
October, 2019
1
August, 2017
Available data
22
bed narrowPeak
18
bam
13
bigWig
7
bed bedgraph
5
bed bed3
4
bed bed3+
3
bigBed narrowPeak
3
txt
1
bed broadPeak
1
bigBed broadPeak
1
fastq
Organism
43
Homo sapiens
Biosample type
470
tissue
191
primary cell
43
in vitro differentiated cells
31
cell line
Organ
18
connective tissue
Project
43
AMP
Genome assembly (visualization)
43
hg19
18
GRCh38
Lab
33
AMP-T2D consortium
5
Kyle Gaulton, UCSD
5
Struan F.A. Grant, CHOP
Audit category:
10
inconsistent ontology term
award.project!
HPAP
month_released!
April, 2019
BIOSAMPLE
ASSAY
43 results
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ATAC-seq
DNase-seq
in vitro differentiated cells
neural progenitor cell
10
adipocyte
8
1
embryonic stem cell
6
Pancreatic progenitors (progenitor cell of endocrine pancreas)
5
chondrocyte
5
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