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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
46
ATAC-seq
9
DNase-seq
1
FAIRE-seq
Assay category
99
DNA binding
67
Transcription
56
DNA accessibility
5
3D chromatin structure
2
DNA methylation
Date released
35
February, 2023
8
February, 2021
6
October, 2019
5
June, 2019
2
July, 2019
Available data
56
bed narrowPeak
21
bam
13
bigWig
10
bigBed narrowPeak
9
bed bed3+
9
bed broadPeak
9
bigBed broadPeak
1
tar
Organism
56
Homo sapiens
Biosample type
43
tissue
8
cell line
5
primary cell
Organ
163
kidney
123
pancreas
77
heart
74
epithelium
58
vasculature
56
blood vessel
49
artery
44
limb
37
brain
35
musculature of body
34
connective tissue
32
eye
29
liver
18
ureter
12
bone element
12
skeleton
10
lung
9
blood
9
bodily fluid
8
adipose tissue
3
nerve
3
vein
2
spleen
1
pituitary gland
1
skin of body
Project
56
AMP
Genome assembly (visualization)
55
GRCh38
20
hg19
Lab
56
AMP-T2D consortium
award.project!
HPAP
lab.title!
Stephen Parker, UMich
BIOSAMPLE
ASSAY
56 results
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ATAC-seq
DNase-seq
FAIRE-seq
tissue
coronary artery
36
2
tibial artery
1
2
ascending aorta
1
thoracic aorta
1
cell line
smooth muscle cell of the coronary artery
8
primary cell
endothelial cell of umbilical vein
2
1
brain microvascular endothelial cell
1
kidney capillary endothelial cell
1
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