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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
34
ATAC-seq
6
DNase-seq
1
FAIRE-seq
Assay category
215
DNA binding
53
Transcription
41
DNA accessibility
5
3D chromatin structure
Date released
155
June, 2019
100
May, 2020
92
February, 2023
82
August, 2021
39
May, 2022
34
May, 2021
27
October, 2019
26
November, 2019
16
February, 2021
14
September, 2018
11
August, 2017
11
May, 2023
10
November, 2018
8
July, 2019
8
October, 2017
5
September, 2017
4
March, 2019
4
March, 2020
3
January, 2018
2
November, 2020
1
August, 2022
Available data
23
bam
23
bed narrowPeak
22
bigBed narrowPeak
22
bigWig
14
fastq
3
bed bed3+
3
bed broadPeak
3
bigBed broadPeak
1
tar
Organism
41
Homo sapiens
Biosample type
21
primary cell
14
tissue
4
in vitro differentiated cells
2
cell line
Organ
21
epithelium
18
pancreas
6
blood vessel
limb
6
vasculature
3
artery
3
connective tissue
3
kidney
3
nerve
3
vein
1
adipose tissue
1
brain
1
eye
1
liver
1
pituitary gland
1
skin of body
Project
41
AMP
Genome assembly (visualization)
26
hg19
22
GRCh38
Lab
41
AMP-T2D consortium
Audit category:
4
inconsistent ontology term
organ_slims!
limb
BIOSAMPLE
ASSAY
41 results
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Clear Filters
ATAC-seq
DNase-seq
FAIRE-seq
primary cell
pancreatic beta cell
4
pancreatic ductal cell
4
endothelial cell of umbilical vein
2
1
pancreatic acinar cell
3
pancreatic alpha cell
3
+ See 4 more…
tissue
islet of Langerhans
13
adipose tissue
1
in vitro differentiated cells
adipocyte
2
cardiac precursors (cardiac muscle cell)
1
cardiomyocytes (cardiac muscle cell)
1
cell line
Panc1
1
glomerular visceral epithelial cell
1
See all biosamples
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