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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
17
ATAC-seq
8
DNase-seq
1
FAIRE-seq
Assay category
207
DNA binding
26
DNA accessibility
24
Transcription
3
3D chromatin structure
Date released
187
June, 2019
100
May, 2020
98
May, 2022
93
February, 2023
70
August, 2021
45
February, 2021
29
May, 2021
26
October, 2019
21
November, 2019
16
January, 2021
14
September, 2018
11
May, 2023
10
April, 2020
10
August, 2017
10
November, 2018
8
July, 2019
8
October, 2017
7
August, 2020
5
September, 2017
4
March, 2019
4
March, 2020
3
January, 2018
3
September, 2020
2
November, 2020
1
August, 2022
Available data
10
bam
10
bed narrowPeak
9
bigWig
8
bigBed narrowPeak
5
bed bed3+
5
bed broadPeak
5
bigBed broadPeak
1
tar
Organism
26
Homo sapiens
Biosample type
17
tissue
7
primary cell
in vitro differentiated cells
2
cell line
Organ
7
epithelium
6
blood vessel
6
limb
6
vasculature
4
pancreas
3
artery
3
kidney
nerve
3
vein
1
adipose tissue
1
brain
1
connective tissue
1
eye
1
liver
1
pituitary gland
1
skin of body
Project
26
AMP
Genome assembly (visualization)
11
hg19
9
GRCh38
Lab
26
AMP-T2D consortium
Audit category:
2
inconsistent ontology term
biosample_type!
in vitro differentiated cells
files.file_type!
txt
organ_slims!
nerve
BIOSAMPLE
ASSAY
26 results
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ATAC-seq
DNase-seq
FAIRE-seq
tissue
islet of Langerhans
13
tibial artery
1
2
adipose tissue
1
primary cell
endothelial cell of umbilical vein
2
1
Heart fetal (cardiac muscle cell)
1
Liver fetal (hepatocyte)
1
kidney glomerular epithelial cell
1
kidney tubule cell
1
cell line
Panc1
1
glomerular visceral epithelial cell
1
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