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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
32
ATAC-seq
27
snATAC-seq
2
DNase-seq
Assay category
637
DNA binding
268
Transcription
61
DNA accessibility
8
DNA methylation
1
3D chromatin structure
Date released
27
February, 2021
14
September, 2018
7
August, 2020
5
August, 2017
5
September, 2017
3
September, 2020
Available data
144
bam
126
bigWig
103
bed narrowPeak
61
fastq
60
zippedFastqFolder
57
bigBed narrowPeak
32
bed bed3+
30
bed broadPeak
30
bigBed broadPeak
13
tsv
7
bed bed3
7
bed bedgraph
3
txt
1
tar
Organism
61
Homo sapiens
Biosample type
60
primary cell
tissue
1
in vitro differentiated cells
Organ
32
epithelium
32
pancreas
1
connective tissue
Project
37
HPAP
24
AMP
Genome assembly (visualization)
33
GRCh38
24
hg19
Lab
37
Klaus Kaestner, Upenn
24
AMP-T2D consortium
Audit category:
27
audit script error
biosample_type!
tissue
organ_slims!
spleen
BIOSAMPLE
ASSAY
61 results
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ATAC-seq
snATAC-seq
DNase-seq
primary cell
Langerhans cell
27
pancreatic alpha cell
13
pancreatic beta cell
10
pancreatic acinar cell
5
pancreatic ductal cell
4
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in vitro differentiated cells
adipocyte
1
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