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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
30
ATAC-seq
6
DNase-seq
1
FAIRE-seq
Assay category
91
Transcription
47
DNA binding
37
DNA accessibility
4
3D chromatin structure
Date released
100
May, 2020
60
May, 2022
41
February, 2021
34
May, 2021
24
February, 2023
24
June, 2019
14
September, 2018
13
October, 2019
12
August, 2021
8
January, 2021
7
August, 2020
6
August, 2017
6
November, 2019
5
September, 2017
3
September, 2020
2
March, 2020
2
November, 2020
1
January, 2018
0
August, 2018
Available data
12
tsv
11
bed narrowPeak
10
bigWig
9
bam
7
bed bed3+
7
bigBed narrowPeak
5
bed bed3
3
bed bedgraph
3
bed broadPeak
3
bigBed broadPeak
3
txt
1
tar
Organism
37
Homo sapiens
Biosample type
tissue
19
primary cell
16
in vitro differentiated cells
2
cell line
Organ
11
connective tissue
7
epithelium
3
blood vessel
3
kidney
3
vasculature
3
vein
1
liver
1
pancreas
Project
37
AMP
Genome assembly (visualization)
23
hg19
8
GRCh38
Lab
34
AMP-T2D consortium
3
Struan F.A. Grant, CHOP
Audit category:
13
inconsistent ontology term
biosample_type!
tissue
BIOSAMPLE
ASSAY
37 results
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ATAC-seq
DNase-seq
FAIRE-seq
primary cell
endothelial cell of umbilical vein
2
1
gabaergic neuron
3
glutamatergic neuron
3
microglial cell/astrocyte
3
oligodendrocyte
3
+ See 4 more…
in vitro differentiated cells
chondrocyte
5
adipocyte
3
immature adipocyte
2
Progenitor cell of Hypothalamus (neural progenitor cell)
1
cardiac precursors (cardiac muscle cell)
1
+ See 4 more…
cell line
Panc1
1
glomerular visceral epithelial cell
1
See all biosamples
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