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Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 42ATAC-seq
  • 1DNase-seq
Assay category
  • 198DNA binding
  • 138Transcription
  • 43DNA accessibility
  • 43D chromatin structure
Date released
  • 12August, 2021
  • 12February, 2023
  • 5May, 2021
  • 5November, 2019
  • 4February, 2021
  • 4October, 2019
  • 1August, 2017
Available data
  • 22bed narrowPeak
  • 18bam
  • 13bigWig
  • 7bed bedgraph
  • 5bed bed3
  • 4bed bed3+
  • 3bigBed narrowPeak
  • 3txt
  • 1bed broadPeak
  • 1bigBed broadPeak
  • 1fastq
Organism
  • 43Homo sapiens
Biosample type
  • 470tissue
  • 288primary cell
  • 43in vitro differentiated cells
  • 31cell line
Organ
  • 18connective tissue
Project
  • 43AMP
Genome assembly (visualization)
  • 43hg19
  • 18GRCh38
Lab
  • 33AMP-T2D consortium
  • 5Kyle Gaulton, UCSD
  • 5Struan F.A. Grant, CHOP
Audit category:
  • 10inconsistent ontology term
BIOSAMPLE
ASSAY

43 results

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Clear Filters
ATAC-seq
DNase-seq
in vitro differentiated cells
neural progenitor cell10
adipocyte81
embryonic stem cell6
Pancreatic progenitors (progenitor cell of endocrine pancreas)5
chondrocyte5
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