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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
198
ATAC-seq
17
snATAC-seq
2
FAIRE-seq
1
DNase-seq
Assay category
936
Transcription
790
DNA binding
218
DNA accessibility
32
DNA methylation
12
3D chromatin structure
Date released
70
August, 2021
68
February, 2023
21
May, 2022
13
October, 2019
11
May, 2023
10
April, 2020
8
February, 2021
8
July, 2019
3
August, 2017
3
October, 2017
2
January, 2018
1
November, 2019
Available data
339
bed narrowPeak
208
bigWig
194
bam
175
bigBed narrowPeak
171
bed bed3+
170
bed broadPeak
bigBed broadPeak
64
xls
12
fastq
5
bed bed3
1
txt
Organism
217
Homo sapiens
Biosample type
218
tissue
189
primary cell
42
in vitro differentiated cells
11
cell line
Organ
82
kidney
pancreas
39
heart
38
blood vessel
38
vasculature
37
artery
28
eye
22
liver
12
bone element
12
epithelium
12
skeleton
10
lung
8
limb
6
adipose tissue
6
connective tissue
5
brain
2
musculature of body
1
nerve
1
pituitary gland
1
skin of body
1
spleen
Project
208
AMP
10
LungMap
Genome assembly (visualization)
132
GRCh38
79
hg19
Lab
107
AMP-T2D consortium
81
Katalin Susztak, Upenn
20
Karen Mohlke, UNC
10
Xin Sun, UCSD
Audit category:
1
audit script error
1
inconsistent ontology term
files.file_type!
bigBed broadPeak
organ_slims!
pancreas
BIOSAMPLE
ASSAY
218 results
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ATAC-seq
snATAC-seq
FAIRE-seq
DNase-seq
tissue
kidney
75
6
1
coronary artery
36
liver
20
retina
15
pigmented layer of retina
12
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