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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
178
ATAC-seq
171
DNase-seq
16
snATAC-seq
2
FAIRE-seq
Assay category
915
Transcription
790
DNA binding
367
DNA accessibility
32
DNA methylation
12
3D chromatin structure
Date released
159
June, 2019
70
August, 2021
68
February, 2023
May, 2022
17
October, 2019
11
May, 2023
10
April, 2020
8
February, 2021
8
July, 2019
7
November, 2018
3
August, 2017
3
October, 2017
2
January, 2018
1
November, 2019
Available data
319
bed narrowPeak
194
bam
188
bigWig
175
bigBed narrowPeak
170
bed bed3+
170
bed broadPeak
170
bigBed broadPeak
64
xls
12
fastq
5
bed bed3
Organism
366
Homo sapiens
Biosample type
367
tissue
196
primary cell
38
in vitro differentiated cells
11
cell line
Organ
150
kidney
66
heart
pancreas
44
limb
43
blood vessel
43
vasculature
41
artery
33
musculature of body
32
brain
31
eye
18
ureter
12
bone element
12
epithelium
12
skeleton
10
lung
8
adipose tissue
8
connective tissue
5
liver
3
nerve
2
spleen
1
pituitary gland
1
skin of body
Project
357
AMP
10
LungMap
Genome assembly (visualization)
302
GRCh38
214
hg19
Lab
276
AMP-T2D consortium
81
Katalin Susztak, Upenn
10
Xin Sun, UCSD
Audit category:
2
inconsistent ontology term
lab.title!
Struan F.A. Grant, CHOP
month_released!
May, 2022
organ_slims!
pancreas
BIOSAMPLE
ASSAY
367 results
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Clear Filters
ATAC-seq
DNase-seq
snATAC-seq
FAIRE-seq
tissue
kidney
75
13
6
1
coronary artery
36
2
heart
18
retina
15
3
muscle of arm
17
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